MSc, BSc and other research projects


MSc project: Protein secondary structure prediction based on statistical method of discriminant analysis

BSc project: Molecular constructions based on double-stranded nucleic acid liquid crystals: formation, properties, practical application

Modelling in applied physics


MSc project: Protein secondary structure prediction based on statistical method of discriminant analysis


Web server and EVA web

  • Achievements

    1. No employment of (multiple) sequence alignment;

    2. Protein properties to explain the structure formation.

  • Structure predictions

    1. Membrane proteins - 1/4 genes, targets for 1/2 drugs.

    2. Beta-turns - the elements of protein active centers.

    3. Ordered-disordered protein regions.

  • Key publications

    1. S.R. Amirova et al., JBSD, Vol 24 (4), pp 421-428, (2007), ISSN 0739-110, PubMed: 17206856.

    2. S.R. Amirova et al., Biofizika, Vol 50 (6), pp 1150-1152, (2005), ISSN 0006-3029, PubMed: 16358798.



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    BSc project: Molecular constructions based on double-stranded nucleic acid liquid crystals: formation, properties, practical application.

    Biotechnological application: determining of homocystine to improve treatment of thromboses in human artery.

  • Achievements

    1. Participation in developing the novel type of bio-sensors (bio-chips) based on lyotropic liquid crystals.

    2. Modelling of thermodynamical process of lyotropic liquid crystals formation.

  • Key publications

    1. Russian Journal of Liquid crystals and their practical realization (2003).

    2. 5th International Meeting on Lyotropic Liquid Crystals (2003).



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    Modelling in applied physics


    Method to increase the Arctic sea ice cover, applications - climate control.

    Processes in fiber-optic sensors with gratings, applications - monitoring environmental changes.

    Vibrations of micro cantilever, applications - microtechnology.

  • Key publications

    1. Journal of Applied Physics (2008),ISSN 0021-8979.

    2. Proceeding of SPIE (2006), (2004), (2002),ISSN 0277-786X.

    3. Sensors and Actuators (2001), ISSN 0924-4247.

    4. Laser Physics (2000),ISSN 1054-660X.



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