Beatbox scalability study (an example)

The job is defined by the script: bigbox_scaling_crn.bbs

This has a big box 302x302x302 cells with bio-physically realistic Courtmanche kinetics (22 ODE per cell) and NO output: see only diff and euler devices there - so convenient for pure scaling purpose. The graph shows the speedup for Beatbox compiled with the mpicc compiler option -O3 ("optimised"), and with -O0 -g compiler option ("non-optimized").

the graph


Mario Antonioletti, Vadim Biktashev, Irina Biktasheva
Last modified: Sat Nov 30 17:40:42 GMT 2013